A Web Tool to Discover Full-Length Sequences - Full-Lengther
نویسندگان
چکیده
Many Expressed Sequence Tags (EST) sequencing projects produce thousands of sequences that must be cleaned and annotated. Here it is presented Full-Lengther, an algorithm that can find out full-length cDNA sequences from EST data. To accomplish this task, Full-Lenther is based on a BLAST report using a protein database such as UniProt. Blast alignments will guide to locate protein coding regions, mainly the start codon. Full-Lengther contains an ORF prediction algorithm for those cases that do not deploy any alignment in the BLAST output. The algorithm is implemented as a web tool to simplify its use and portability. This can be worldwide accessible via http://castanea.ac.uma.es/genuma/full-lengther/.
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